Publications of Tobias J. Erb

Erb, T. J.: Künstliche Photosynthese: Rohstoff CO₂? 3sat (2020)

Rasor, B. J.; Erb, T. J.: Cell-free systems to mimic and expand metabolism. ACS Synthetic Biology 14 (2), pp. 316 - 322 (2025)

Puiggené, Ò.; Muñoz-Triviño, J.; Civil-Ferrer, L.; Gille, L.; Schulz-Mirbach, H.; Bergen, D.; Erb, T. J.; Ebert, B. E.; Nikel, P. I.: Systematic engineering of synthetic serine cycles in Pseudomonas putida uncovers emergent topologies for methanol assimilation. bioRxiv: the preprint server for biology, 2025.02.17.638773 (2025)

Orsi, E.; Schulz-Mirbach, H.; Cotton, C. A.R.; Satanowski, A.; Petri, H.; Arnold, S. L.; Grabarczyk, N.; Verbakel, R.; Jensen, K. S.; Donati, S. et al.; Paczia, N.; Glatter, T.; Küffner, A. M.; Chotel, T.; Schillmueller, F.; De Maria, A.; He, H.; Lindner, S. N.; Noor, E.; Bar-Even, A.; Erb, T. J.; Nikel, P. I.: Expanding the biotechnological scope of metabolic sensors through computation-aided designs. bioRxiv: the preprint server for biology, 2024.08.23.609350 (2024)

Küffner, A. M.; Pommerenke, B.; Kley, L.; Ng, J. Z. Y.; Prinz, S.; Tinzl-Zechner, M.; Claus, P.; Paczia, N.; Zarzycki, J.; Hochberg, G. K. A. et al.; Erb, T. J.: Bottom-up reconstruction of minimal pyrenoids provides insights into the evolution and mechanisms of carbon concentration by EPYC1 proteins. bioRxiv: the preprint server for biology, 2024.06.28.601168 (2024)

Inckemann, R.; Chotel, T.; Brinkmann, C. K.; Burgis, M.; Andreas, L.; Baumann, J.; Sharma, P.; Klose, M.; Barret, J.; Ries, F. et al.; Paczia, N.; Glatter, T.; Mackinder, L.; Willmund, F.; Erb, T. J.: Advancing chloroplast synthetic biology through high-throughput plastome engineering of Chlamydomonas reinhardtii. bioRxiv: the preprint server for biology, 2024.05.08.593163 (2024)

Barthel, S.; Brenker, L.; Diehl, C.; Bohra, N.; Giaveri, S.; Paczia, N.; Erb, T. J.: In vitro transcription-based biosensing of glycolate for prototyping of a complex enzyme cascade. bioRxiv: the preprint server for biology, 2024.04.26.591264 (2024)

Joachimiak, A.; Kim, Y.; Lee, S. H.; Gade, P.; Nattermann, M.; Maltseva, N.; Endres, M.; Chen, J.; Wichmann, P.; Hu, Y. et al.; Marchal, D. G.; Yoshikuni, Y.; Erb, T. J.; Gonzalez, R.; Michalska, K.: Revealing reaction intermediates in one-carbon elongation ThDP/CoA dependent enzyme family. Research Square (2024)

Schada v. Borzyskowsi, L.; Hermann, L.; Kremer, K.; Barthel, S.; Pommerenke, B.; Glatter, T.; Paczia, N.; Bremer, E.; Erb, T. J.: Multiple levels of transcriptional regulation control glycolate metabolism in Paracoccus denitrificans. bioRxiv: the preprint server for biology, 2024.03.11.584432 (2024)

Schulz, L.; Zarzycki, J.; Steinchen, W.; Hochberg, G. K. A.; Erb, T. J.: Layered entrenchment maintains essentiality in protein-protein interactions. bioRxiv: the preprint server for biology, 2024.01.18.576253 (2024)

Giaveri, S.; Bohra, N.; Diehl, C.; Ballinger, M.; Paczia, N.; Glatter, T.; Erb, T. J.: An interdependent metabolic and genetic network shows emergent properties in vitro. bioRxiv: the preprint server for biology, 2023.11.26.568713 (2023)

Gomez, A.; Erb, T. J.; Grubmüller, H.; Vöhringer-Martinez, E.: Conformational dynamics of the most efficient carboxylase contributes to efficient CO₂ fixation. ChemRxiv: the Preprint Server for Chemistry, chemrxiv-2023-xt3rv (2023)

Schann, K.; Bakker, J.; Boinot, M.; Kuschel, P.; He, H.; Nattermann, M.; Erb, T. J.; Bar-Even, A.; Wenk, S.: Design, construction and optimization of formaldehyde growth biosensors with broad application in biotechnology. bioRxiv: the preprint server for biology, 2023.06.29.547045 (2023)

Gerlinger, P.; Angelidou, G.; Paczia, N.; Erb, T. J.: Ketosynthase engineering enhances activity and shifts specificity towards non-native extender units in type I linear polyketide synthase. bioRxiv: the preprint server for biology, 2023.02.16.528826 (2023)

Schmidt, F. V.; Schulz, L.; Zarzycki, J.; Oehlmann, N. N.; Prinz, S.; Erb, T. J.; Rebelein, J. G.: Structural insights into the iron nitrogenase complex. bioRxiv: the preprint server for biology, 2023.05.02.539077 (2023)

Pandi, A.; Adam, D.; Zare, A.; Trinh, V. T.; Schaefer, S. L.; Wiegand, M.; Klabunde, B.; Bobkova, E.; Kushwaha, M.; Foroughijabbari, Y. et al.; Braun, P.; Spahn, C. K.; Preußer, C.; von Strandmann, E. P.; Bode, H. B.; Buttlar, H.; Bertrams, W.; Jung, A. L.; Abendroth, F.; Schmeck, B.; Hummer, G.; Vázquez, O.; Erb, T. J.: Cell-free biosynthesis combined with deep learning accelerates de novo-development of antimicrobial peptides. bioRxiv: the preprint server for biology, 2022.11.19.517184 (2022)

Dronsella, B.; Orsi, E.; Benito-Vaquerizo, S.; Glatter, T.; Bar-Even, A.; Erb, T. J.; Claassens, N. J.: Engineered synthetic one-carbon fixation exceeds yield of the Calvin Cycle. bioRxiv: the preprint server for biology, 2022.10.19.512895 (2022)

DeMirci, H.; Rao, Y.; Stoffel, G. M. M.; Vögeli, B.; Schell, K.; Gomez, A.; Batyuk, A.; Gati, C.; Sierra, R. G.; Hunter, M. S. et al.; Dao, E. H.; Ciftci, H. I.; Hayes, B.; Poitevin, F.; Li, P.-N.; Kaur, M.; Tono, K.; Saez, D. A.; Deutsch, S.; Yoshikuni, Y.; Grubmüller, H.; Erb, T. J.; Vöhringer-Martinez, E.; Wakatsuki, S.: Inter-subunit coupling enables fast CO₂-fixation by reductive carboxylases. bioRxiv: the preprint server for biology, 607101 (2022)

Schada v. Borzyskowsi, L.; Schulz-Mirbach, H.; Troncoso Castellanos, M.; Severi, F.; Gomez Coronado, P. A.; Glatter, T.; Bar-Even, A.; Lindner, S. N.; Erb, T. J.: Implementation of the β-hydroxyaspartate cycle increases growth performance of Pseudomonas putida on the PET monomer ethylene glycol. bioRxiv: the preprint server for biology, 2022.08.08.503134 (2022)

Bouzon, M.; Döring, V.; Dubois, I.; Berger, A.; Stoffel, G. M. M.; Ramirez, L. C.; Meyer, S.; Fouré, M.; Roche, D.; Perret, A. et al.; Erb, T. J.; Bar-Even, A.; Lindner, S. N.: Emergence of NADP⁺-reducing enzymes in Escherichia coli central metabolism via adaptive evolution. bioRxiv: the preprint server for biology, 2021.02.08.430375 (2021)