Publications of Katharina Höfer

Pozhydaieva, N.; Billau, F. A.; Wolfram-Schauerte, M.; Ramírez Rojas, A. A.; Paczia, N.; Schindler, D.; Höfer, K.: Temporal epigenome modulation enables efficient bacteriophage engineering and functional analysis of phage DNA modifications. PLOS Genetics 20 (9), e1011384 (2024)

Cortés-Martín, A.; Buttimer, C.; Pozhydaieva, N.; Hille, F.; Shareefdeen, H.; Bolocan, A. S.; Draper, L. A.; Shkoporov , A. N.; Franz , C. M. A. P.; Höfer, K. et al.; Ross, P. R.; Hill, C.: Isolation and characterization of Septuagintavirus; a novel clade of Escherichia coli phages within the subfamily Vequintavirinae. Microbiology Spectrum 12 (9), e00592-24 (2024)

Pozhydaieva, N.; Wolfram-Schauerte, M.; Keuthen, H.; Höfer, K.: The enigmatic epitranscriptome of bacteriophages: putative RNA modifications in viral infections. Current Opinion in Microbiology 77, 102417 (2024)

Gomes-Filho, J. V.; Breuer, R.; Morales-Filloy, H. G.; Pozhydaieva, N.; Borst, A.; Paczia, N.; Soppa, J.; Höfer, K.; Jäschke, A.; Randau, L.: Identification of NAD-RNA species and ADPR-RNA decapping in Archaea. Nature Communications 14, 7597 (2023)

Lai, L. B.; Gopalan, V.; Jansson, M. D.; Chen, Q.; Zhang, X.; Wolfram-Schauerte, M.; Höfer, K.: Making nucleic acid structures and schematics. Trends in Biochemical Sciences 48 (8), pp. 655 - 658 (2023)

Gratani, F. L.; Englert, T.; Nashier, P.; Sass, P.; Czech, L.; Neumann, N.; Doello, S.; Mann, P.; Blobelt, R.; Alberti, S. et al.; Forchhammer, K.; Bange, G.; Höfer, K.; Macek, B.: E. coli toxin YjjJ (HipH) is a Ser/Thr protein kinase that impacts cell division, carbon metabolism, and ribosome assembly. mSystems 8 (1), e01043-22 (2023)

Wolfram-Schauerte, M.; Pozhydaieva, N.; Grawenhoff, J.; Welp, L. M.; Silbern, I.; Wulf, A.; Billau, F. A.; Glatter, T.; Urlaub, H.; Jäschke, A. et al.; Höfer, K.: A viral ADP-ribosyltransferase attaches RNA chains to host proteins. Nature 620 (7976), pp. 1054 - 1062 (2023)

Yousefi, M. H.; Wagemans, J.; Shekarforoush, S. S.; Vallino, M.; Pozhydaieva, N.; Höfer, K.; Lavigne, R.; Hosseinzadeh, S.: Isolation and molecular characterization of the Salmonella typhimurium orphan phage Arash. BMC Microbiology 23, 297 (2023)

Wolfram-Schauerte, M.; Pozhydaieva, N.; Viering, M.; Glatter, T.; Höfer, K.: Integrated omics reveal time-resolved insights into T4 phage infection of E. coli on proteome and transcriptome levels. Viruses 14 (11), 2502 (2022)

Hinrichs, R.; Pozhydaieva, N.; Höfer, K.; Graumann, P. L.: Y-complex proteins show RNA-dependent binding events at the cell membrane and distinct single-molecule dynamics. Cells 11 (6), 933 (2022)

Schauerte, M.; Pozhydaieva, N.; Höfer, K.: Shaping the bacterial epitranscriptome-5'-terminal and internal RNA modifications. Advanced Biology 5 (8), e2100834 (2021)

Kolmar, T.; Büllmann, S. M.; Sarter, C.; Höfer, K.; Jäschke, A.: Development of High-Performance Pyrimidine Nucleoside and Oligonucleotide Diarylethene Photoswitches. Angewandte Chemie International Edition 60 (15), pp. 8164 - 8173 (2021)

Wolfram-Schauerte, M.; Pozhydaieva, N.; Höfer, K.: Molekulare Schnappschüsse der Phageninfektion. (2023)

Höfer, K.; Jäschke, A.: NAD-modifizierte RNA: Redox - biochemie trifft RNA-Prozessierung. (2018)

Pozhydaieva, N.; Höfer, K.: Utilizing Golden Gate Assembly to streamline CRISPR-Cas/NgTET-based phage mutagenesis. In: Golden Gate Cloning. Methods in Molecular Biology, Vol. 2850 , pp. 329 - 343 (Ed. Schindler, D.). Humana, New York, NY. (2025)

Yilmaz Demirel, N.; Weber, M.; Höfer, K.: Bridging the gap: RNAylation conjugates RNAs to proteins. Biochimica et Biophysica Acta: BBA 1871 (8), 119826 (2024)

Wolfram-Schauerte, M.; Höfer, K.: NAD-capped RNAs - a redox cofactor meets RNA. Trends in Biochemical Sciences 48 (2), pp. 142 - 155 (2023)

Wolfram-Schauerte, M.; Moskalchuk, A.; Pozhydaieva, N.; Ramírez Rojas, A. A.; Schindler, D.; Kaiser, S.; Paczia, N.; Höfer, K.: T4 phage RNA is NAD-capped and alters the NAD-cap epitranscriptome of Escherichia coli during infection through a phage-encoded decapping enzyme. bioRxiv: the preprint server for biology, 2024.04.04.588121 (2024)

Pozhydaieva, N.; Billau, F. A.; Wolfram-Schauerte, M.; Ramírez Rojas, A. A.; Paczia, N.; Schindler, D.; Höfer, K.: Temporal epigenome modulation enables efficient bacteriophage engineering and functional analysis of phage DNA modifications. bioRxiv: the preprint server for biology, 2024.01.28.577628 (2024)

Gomes-Filho, J. V.; Breuer, R.; Morales-Filloy, H. G.; Pozhydaieva, N.; Borst, A.; Paczia, N.; Soppa, J.; Höfer, K.; Jäschke, A.; Randau, L.: Identification of NAD-RNAs and ADPR-RNA decapping in the archaeal model organisms Sulfolobus acidocaldarius and Haloferax volcanii. bioRxiv: the preprint server for biology, 2022.11.02.514978 (2022)